OPEN SOURCE · LOCAL-FIRST · SCIENTIFIC AGENT WORKSPACEVOL. 01 / v0.14.0

Wisp ScienceFrom research question to reproducible artifact.

Wisp Science brings papers, local data, Python, biological databases, and agent workflows into one traceable workspace—on desktop or through a headless CLI.

Bring your own model. Keep project state local.

RESEARCH RECORD · WS-014Analysis trace preserved
QUESTION

Which pathways distinguish the treatment-responsive cell population?

responsive population
01Evidence

12 papers · 3 local datasets

02Method

Scanpy workflow · persistent Python

03Result

Marker table · UMAP · methods note

Fig. 01 — Evidence, code, tool calls, and exported artifacts remain linked to the same session.
0139

v0.14.0 bundled research SKILLs

0280+

scientific databases reached through MCP

03Python / R

persistent project runtimes

04Local

sessions, artifacts, and SQLite history

LATEST RELEASE

Install Wisp Science and begin with a local project.

Release files are served by GitHub. Package checksums are published here so each download can be verified before use.

Current releasev0.14.0

Published Jul 16, 2026. macOS packages are signed and notarized; Windows packages remain unsigned and may trigger SmartScreen.

Read release notes
macOSDMG

Apple Silicon

M-series Macs · signed and notarized

SHA256fb29ff801e1a86c1fa3fb5f08894f39fe36c0d4edb6b778fe4bd352a6c0a4755
Download Apple Silicon
macOSDMG

Intel

Intel Macs · signed and notarized

SHA25666641caf386d63955c7d29eb6b1ff008b1ae8d49240a879bddda549252b5d6b0
Download Intel
WindowsEXE

Setup EXE

Standard Windows installer

SHA2560548774ca0b0acffa30352c3119b43f56f480b68ecea38c6f3ab157d8de0123a
Download Setup EXE
WindowsMSI

MSI

Enterprise-style installer package

SHA2566fe544f526d9249ad2a8ce5dfb6cc5fc67a7c01f4622479465b19f746d423956
Download MSI

RELEASE NOTES

What changed in v0.14.0

Read the full release notes

wisp-science v0.14.0 improves the conversation workspace, ACP collaboration flows, and desktop stability with ACP-backed side chat, a session mode selector, verifiable reviewer/harness access, durable message resource bindings, script file previews, one-click quote-to-chat selection, transcript/session pagination, math rendering, and a broad set of memory, rendering, preview, and UI consistency fixes.

01

What's changed

  • Add ACP-backed side chat, a session mode selector, durable message resource bindings, safer reviewer lifecycle handling, and verifiable reviewer/harness backend selection.
  • Confirm model switches that invalidate caches before applying them.
  • Preview script files directly and send selected workspace text into the composer or side chat.
  • Paginate long session history and transcripts, and consolidate top-bar, model-switcher, agent/context, and compute-host UI surfaces.
  • Bound memory growth across UI events, tool snapshots, artifacts, processes, and long transcript rendering.
  • Render Markdown math, fix JPEG2000 figures in WebView PDF preview, improve dark code highlighting, and clean up artifact/workspace UI inconsistencies.

WISP SCIENCE

Used by researchers from universities and research teams

  • Cornell University
  • University of Michigan
  • UCLA
  • Yale University
  • Tsinghua University

Affiliations are self-reported by individual users and do not imply institutional partnership, sponsorship, or endorsement.

WHAT STAYS WITH YOUR PROJECT

Keep sources, analysis, and results in one research workspace.

Work with papers and local files, run Python or R, query scientific databases, and keep code, figures, and decisions together. Your project stays on this computer; Wisp Science connects to an outside service only when you use one you configured.

IN YOUR PROJECT

What Wisp Science keeps together

  1. 01
    SOURCES

    Papers and local files

    Bring the material for one question into a project without losing track of the original files.

  2. 02
    PROCESS

    Questions, plans, and decisions

    Keep the reasoning behind each step beside the task, so you can review or continue the work later.

  3. 03
    ANALYSIS

    Python, R, and research SKILLs

    Run analysis and reusable workflows in the same project instead of moving data and context between separate tools.

  4. 04
    RESULTS

    Code, tables, figures, and history

    Return to the code, outputs, and conversation that produced a result when you need to check or share it.

BEFORE DATA LEAVES THIS COMPUTERLocal project files, explicit outside connections.

Project files, session history, and generated results are stored locally. If a task uses a model, database, ACP agent, or remote compute environment, the information needed for that step is handled under that service’s settings and credentials. Review sensitive material before enabling an outside connection.

A TRACEABLE RESEARCH LOOP

Move from discovery to communication without losing the method.

Each stage remains connected to its evidence, code, tools, and generated outputs, so the final report is a record of the work—not just an answer.

  1. 01

    Discover

    Search papers and biological databases, inspect local files, and assemble evidence around the question.

  2. 02

    Analyze

    Run persistent Python or R, shell, MCP tools, and domain SKILL workflows while preserving project-scoped state.

  3. 03

    Verify

    Review plans before execution, inspect intermediate files, and trace every artifact back to inputs and code.

  4. 04

    Communicate

    Export figures, tables, methods, citations, and narrative reports from one coherent research record.

REPRODUCIBILITY, BUILT INTO THE SESSION

Evidence, code, and context—kept in the same research record.

Tables, figures, code blocks, LaTeX equations, and file paths can become artifacts. Each stays connected to its producing conversation, code, logs, inputs, and environment details.

01

@ file references

Attach the file already open or any file in the current project without breaking the research context.

02

Plan approval

Let the agent propose a multi-step method, pause for review, and only continue after approval.

03

Artifact provenance

Open tables, figures, code, formulas, and file references together with the context and inputs that produced them.

PROVENANCE LEDGERWS / TRACE-014
01Inputcounts_matrix.h5adsha256 verified
02Methodscanpy_marker_workflow29 steps logged
03Figureumap_response.pngcode attached
04Reportmethods_and_results.mdcitations linked
REPRODUCIBLE

RESEARCH PLATES

One workspace, different scientific questions.

Compose database retrieval, local computation, domain workflows, and structured writing around the task at hand.

PLATE 0101 / 04

Single-cell analysis

Run Scanpy or scVI-style workflows, annotate populations, and export UMAPs, marker tables, and methods notes.

UMAP · MARKERS · METHODS
PLATE 0202 / 04

Protein structure

Fetch sequences and structures, combine AlphaFold-, Boltz-, or OpenFold-style skills, and draft structured interpretation.

SEQUENCE · STRUCTURE · REPORT
PLATE 0303 / 04

Cheminformatics

Search ChEMBL or PubChem, compare activity data, calculate properties, and prepare SAR-style tables.

ACTIVITY · PROPERTIES · SAR
PLATE 0404 / 04

Literature and writing

Search PubMed or Semantic Scholar, inspect PDFs, draft discussion sections, and keep citations with the text.

PAPERS · CITATIONS · DRAFT

FIELD NOTES FROM THE BENCH

How researchers move work forward.

Not a vague “analyze this” prompt, but a concrete research task advanced with evidence, code, and a traceable record.

01 / 06

Start by QCing this single-cell dataset, then help me identify those clusters. Keep every parameter, figure, and rationale—I need to walk through it at lab meeting tomorrow.

PhD Student in BioinformaticsKeeps QC parameters, plots, code, and annotation decisions together for review.
02 / 06

Map the preclinical studies on this target from the past five years. Don’t just give me a conclusion—show the sources, conflicting findings, and evidence that is still missing.

Drug Discovery ResearcherBuilds an auditable evidence map instead of a confident-looking summary.
03 / 06

Could these mutations affect protein stability? Check the databases and literature first, then give me a locally reproducible analysis plan without moving the raw data off my computer.

Structural Biology ResearcherConnects database evidence and literature to a reproducible local analysis.
04 / 06

I added 20 papers to the project. Organize the controls by experimental system, flag inconsistent numbers, and make every finding traceable to the original text.

Postdoctoral Researcher in Molecular BiologyCompares experimental designs across papers while preserving source-level traceability.
05 / 06

Don’t interpret these metabolomics results yet. Check missing values, batch effects, and outliers first, then turn the recommended statistical steps into a rerunnable script.

Translational Medicine ResearcherPrioritizes data-quality checks before producing a reproducible analysis workflow.
06 / 06

Search ChEMBL and PubChem for these candidate molecules, compare activity, selectivity, and known risks, then identify the three most valuable experiments to run next.

Computational Chemistry ResearcherCombines database evidence with local analysis to prioritize costly follow-up experiments.

Anonymous early-user feedback. Identities are summarized, wording has been lightly edited for length and clarity, and portraits are illustrative.

QUESTIONS BEFORE YOU BEGIN

What Wisp Science is—and where its boundaries are.

01Is Wisp Science a new model?

No. It is an open-source desktop and CLI application that uses the model provider and credentials you configure.

02How is it different from a generic AI assistant?

It can execute local Python, shell and file tools, call MCP databases, follow domain SKILL workflows, and retain artifact provenance.

03Does research data stay private?

Project files, sessions, artifacts, and settings remain local. Prompts and responses still pass through your configured model provider.

04Is it production-stable?

Wisp Science is an active preview for local scientific workflows. Review critical methods and outputs, and check release notes for current signing and update status.